Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 AC239868.1-201ENST00000369385 493 ntBASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 USP17L6P-201ENST00000382470 1197 ntBASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 FNTAP2-201ENST00000430308 634 ntBASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 KRT18P15-201ENST00000458108 1291 ntBASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 AC140658.4-201ENST00000561990 352 ntBASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 AL161670.2-201ENST00000557650 1227 ntBASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ACTG1P17-201ENST00000558391 1119 ntBASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.58■□□□□ 0.73
NPC1L1Q9UHC9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPC1L1Q9UHC9 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC116345.2-201ENST00000512837 523 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC007952.5-201ENST00000572818 1486 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AL157791.1-201ENST00000553667 1699 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC008132.1-202ENST00000342005 1389 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 RNA5SP359-201ENST00000364838 113 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms