Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 GHSR-202ENST00000427970 912 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AKR7A2P1-201ENST00000460134 915 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AC068587.10-201ENST00000641210 219 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AL360270.3-201ENST00000609118 1348 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AC106881.1-201ENST00000605849 3329 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CICP11-201ENST00000434745 2827 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 AC007292.2-201ENST00000593524 1812 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 AL136309.1-201ENST00000403917 691 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 MESTP3-201ENST00000503460 968 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 AC126915.1-201ENST00000522847 1038 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 CLUHP2-201ENST00000426660 1303 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 SNX18-202ENST00000343017 3140 ntBASIC14.81□□□□□ -0.04
SPASTQ9UBP0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.81□□□□□ -0.04
SPASTQ9UBP0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 AC023908.3-201ENST00000564211 3047 ntBASIC14.8□□□□□ -0.04
SPASTQ9UBP0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPASTQ9UBP0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms