Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC055876.3-201ENST00000431496 288 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 RFPL4AP1-201ENST00000530883 850 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 Z97205.2-201ENST00000564697 1639 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC015818.8-201ENST00000587907 1519 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC025048.3-201ENST00000590609 569 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC138649.4-201ENST00000612222 287 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 AC005702.4-201ENST00000618393 416 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 AL390754.1-201ENST00000619088 582 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 AL590560.3-201ENST00000623350 461 ntBASIC13.26□□□□□ -0.29
NLKQ9UBE8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.25□□□□□ -0.29
NLKQ9UBE8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AC138969.3-201ENST00000546612 1459 ntBASIC13.25□□□□□ -0.29
NLKQ9UBE8 AC138932.2-201ENST00000548268 1459 ntBASIC13.25□□□□□ -0.29
NLKQ9UBE8 AC126755.4-201ENST00000549796 1459 ntBASIC13.25□□□□□ -0.29
NLKQ9UBE8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 SDHAP3-202ENST00000515467 728 ntBASIC13.25□□□□□ -0.29
NLKQ9UBE8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 AC074044.1-201ENST00000609673 707 ntBASIC13.25□□□□□ -0.29
NLKQ9UBE8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms