Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 CTAGE13P-201ENST00000416709 2446 ntBASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 MMP2-203ENST00000543485 1978 ntTSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AC010624.1-201ENST00000527209 1525 ntTSL 2 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDC42SE1Q9NRR8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AP001282.1-201ENST00000531301 1499 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CSPG4P10-201ENST00000456932 4817 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 MSTO2P-201ENST00000314835 1709 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 WASH2P-201ENST00000453662 1684 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 LILRB2-203ENST00000391748 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AC087741.1-201ENST00000570309 4399 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 AC007336.3-201ENST00000623886 2160 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms