Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 AL512430.1-201ENST00000392575 860 ntBASIC16.42■□□□□ 0.22
VTA1Q9NP79 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 DUX4L50-201ENST00000455245 715 ntBASIC16.42■□□□□ 0.22
VTA1Q9NP79 CHCHD2P9-201ENST00000461726 456 ntBASIC16.42■□□□□ 0.22
VTA1Q9NP79 RN7SL8P-201ENST00000461771 266 ntBASIC16.42■□□□□ 0.22
VTA1Q9NP79 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 DNM1P30-201ENST00000563586 452 ntBASIC16.42■□□□□ 0.22
VTA1Q9NP79 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.42■□□□□ 0.22
VTA1Q9NP79 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTA1Q9NP79 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 LINC00554-201ENST00000564841 3011 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 AL807761.2-201ENST00000422849 729 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 RPL7P35-201ENST00000446943 740 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 NDUFS6P1-201ENST00000485187 316 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 MIR4750-201ENST00000584564 56 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 AC007326.1-201ENST00000604539 458 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 AC009560.1-201ENST00000620208 434 ntBASIC16.41■□□□□ 0.22
VTA1Q9NP79 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTA1Q9NP79 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.41■□□□□ 0.22
VTA1Q9NP79 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms