Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AC104457.1-201ENST00000401024 814 ntBASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 BANF1P1-201ENST00000553684 263 ntBASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AC018529.1-201ENST00000613063 361 ntBASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 FAM197Y3-203ENST00000618346 717 ntBASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC015818.8-201ENST00000587907 1519 ntBASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 YBX2P1-201ENST00000394192 760 ntBASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC023274.1-201ENST00000418278 595 ntBASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 TMEM198B-204ENST00000484016 896 ntBASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 ALG1L8P-201ENST00000533887 760 ntBASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 AC003101.2-201ENST00000612557 442 ntBASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC9.99□□□□□ -0.81
SND1-IT1Q9HBX3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms