Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 AC126915.1-201ENST00000522847 1038 ntBASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 AC018442.1-201ENST00000421439 2061 ntBASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATP6V0A4Q9HBG4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 BX284668.4-201ENST00000453917 508 ntBASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 ACTG1P17-201ENST00000558391 1119 ntBASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC018735.1-201ENST00000437208 1502 ntBASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 SHC1P1-201ENST00000425230 1745 ntBASIC16.48■□□□□ 0.23
ATP6V0A4Q9HBG4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AC010141.1-201ENST00000411585 623 ntBASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AL354877.1-201ENST00000424412 413 ntBASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AC005077.2-201ENST00000449786 690 ntBASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0A4Q9HBG4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms