Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J2Q9GZM3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J2Q9GZM3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AC089987.1-201ENST00000551654 2209 ntBASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 GIMAP3P-201ENST00000495150 836 ntBASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J2Q9GZM3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.77□□□□□ -0.2
POLR2J2Q9GZM3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.77□□□□□ -0.2
POLR2J2Q9GZM3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J2Q9GZM3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J2Q9GZM3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J2Q9GZM3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 C1QBPP1-201ENST00000400117 770 ntBASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 KRT8P22-201ENST00000562317 1415 ntBASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J2Q9GZM3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J2Q9GZM3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
POLR2J2Q9GZM3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J2Q9GZM3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
POLR2J2Q9GZM3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms