Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
FOXP3Q9BZS1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 DRD5P1-201ENST00000456605 1438 ntBASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 MIR4259-201ENST00000584466 101 ntBASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 AL158212.4-201ENST00000624062 1286 ntBASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 AL138799.1-201ENST00000448213 1675 ntBASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
FOXP3Q9BZS1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 KRT8P14-201ENST00000414254 1442 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 AC011840.2-201ENST00000563063 1520 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 CROCCP4-201ENST00000457096 498 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 AC026410.3-201ENST00000514280 936 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 AL391069.4-201ENST00000609583 481 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 PRSS30P-206ENST00000641773 873 ntBASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
FOXP3Q9BZS1 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXP3Q9BZS1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.33■□□□□ 0.05
FOXP3Q9BZS1 AC005252.3-201ENST00000623855 2258 ntBASIC15.33■□□□□ 0.05
FOXP3Q9BZS1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
FOXP3Q9BZS1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXP3Q9BZS1 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms