Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 RN7SL11P-201ENST00000471305 293 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 MARK2P5-201ENST00000507649 634 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 ALG3P1-201ENST00000508806 1114 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AC105129.2-201ENST00000559536 390 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AC090164.2-201ENST00000611487 516 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AL136295.7-201ENST00000619226 1200 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 CU633904.3-201ENST00000624042 1029 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 AC026748.1-201ENST00000624349 3251 ntBASIC17.21■□□□□ 0.35
SLF1Q9BQI6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLF1Q9BQI6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SLF1Q9BQI6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLF1Q9BQI6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLF1Q9BQI6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.21■□□□□ 0.34
SLF1Q9BQI6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AC244394.1-201ENST00000435000 1665 ntBASIC17.2■□□□□ 0.34
SLF1Q9BQI6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 KLF2P1-201ENST00000447438 1042 ntBASIC17.2■□□□□ 0.34
SLF1Q9BQI6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AC091812.3-201ENST00000621362 345 ntBASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AL805961.1-203ENST00000641078 1258 ntBASIC17.2■□□□□ 0.34
SLF1Q9BQI6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 LINC01101-201ENST00000622953 1884 ntBASIC17.2■□□□□ 0.34
SLF1Q9BQI6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLF1Q9BQI6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.19■□□□□ 0.34
SLF1Q9BQI6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms