Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC093525.8-201ENST00000624099 1342 ntBASIC11.33□□□□□ -0.6
VGLL1Q99990 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 AGGF1P1-201ENST00000509500 2073 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.32□□□□□ -0.6
VGLL1Q99990 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VGLL1Q99990 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC107890.1-201ENST00000422478 521 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 AC092580.3-201ENST00000430932 139 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AL353779.1-201ENST00000434793 351 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.32□□□□□ -0.6
VGLL1Q99990 DNAJB3-202ENST00000449667 1266 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 ZNF890P-202ENST00000530367 1156 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC004449.1-201ENST00000564240 433 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 AC140878.1-201ENST00000565277 250 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
VGLL1Q99990 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.32□□□□□ -0.6
VGLL1Q99990 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC023511.2-201ENST00000618803 211 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 MBLAC2-202ENST00000514906 1936 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC011474.4-201ENST00000623523 2076 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AL731571.1-201ENST00000617058 5428 ntBASIC11.32□□□□□ -0.6
VGLL1Q99990 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
VGLL1Q99990 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VGLL1Q99990 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
VGLL1Q99990 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms