Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.22□□□□□ -0.29
VRK1Q99986 BAATP1-201ENST00000412284 1225 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
VRK1Q99986 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.22□□□□□ -0.29
VRK1Q99986 KLF2P4-201ENST00000451959 1225 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.22□□□□□ -0.29
VRK1Q99986 CTBP2P5-201ENST00000454986 1264 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.22□□□□□ -0.29
VRK1Q99986 AP001063.1-201ENST00000568332 529 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.22□□□□□ -0.29
VRK1Q99986 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.22□□□□□ -0.29
VRK1Q99986 AC093813.1-201ENST00000605066 256 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 AC107373.2-201ENST00000607735 490 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
VRK1Q99986 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VRK1Q99986 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VRK1Q99986 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 DRD5P1-201ENST00000456605 1438 ntBASIC13.22□□□□□ -0.29
VRK1Q99986 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VRK1Q99986 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.21□□□□□ -0.29
VRK1Q99986 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VRK1Q99986 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.21□□□□□ -0.29
VRK1Q99986 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.21□□□□□ -0.29
VRK1Q99986 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.21□□□□□ -0.29
VRK1Q99986 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.21□□□□□ -0.29
VRK1Q99986 AC093433.1-201ENST00000458048 571 ntBASIC13.21□□□□□ -0.29
VRK1Q99986 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
VRK1Q99986 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
VRK1Q99986 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.21□□□□□ -0.29
VRK1Q99986 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.21□□□□□ -0.29
VRK1Q99986 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 RPSAP52-203ENST00000622976 1023 ntBASIC13.21□□□□□ -0.29
VRK1Q99986 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.21□□□□□ -0.29
VRK1Q99986 COX11-210ENST00000639671 696 ntBASIC13.21□□□□□ -0.29
VRK1Q99986 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VRK1Q99986 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VRK1Q99986 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
VRK1Q99986 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 AC136759.1-202ENST00000530858 2194 ntBASIC13.21□□□□□ -0.3
VRK1Q99986 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.21□□□□□ -0.3
VRK1Q99986 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VRK1Q99986 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.21□□□□□ -0.3
VRK1Q99986 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 REXO1L2P-201ENST00000425429 2069 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 INTS4P1-203ENST00000641008 3683 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.2□□□□□ -0.3
VRK1Q99986 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 PDIA3P1-201ENST00000471856 1510 ntBASIC13.2□□□□□ -0.3
VRK1Q99986 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VRK1Q99986 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VRK1Q99986 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms