Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CGREF1Q99674 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.15□□□□□ -0.14
CGREF1Q99674 AL139094.1-201ENST00000405549 1188 ntBASIC14.15□□□□□ -0.14
CGREF1Q99674 AP000347.1-202ENST00000435868 847 ntBASIC14.15□□□□□ -0.14
CGREF1Q99674 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.15□□□□□ -0.14
CGREF1Q99674 AC009477.1-201ENST00000452936 217 ntBASIC14.15□□□□□ -0.14
CGREF1Q99674 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.15□□□□□ -0.14
CGREF1Q99674 VDAC1P7-201ENST00000462417 847 ntBASIC14.15□□□□□ -0.14
CGREF1Q99674 AL662799.1-202ENST00000614205 422 ntBASIC14.15□□□□□ -0.14
CGREF1Q99674 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CGREF1Q99674 AC134684.3-201ENST00000641758 218 ntBASIC14.15□□□□□ -0.14
CGREF1Q99674 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CGREF1Q99674 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.15□□□□□ -0.14
CGREF1Q99674 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CGREF1Q99674 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.15□□□□□ -0.14
CGREF1Q99674 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CGREF1Q99674 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CGREF1Q99674 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.14□□□□□ -0.15
CGREF1Q99674 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 AC087386.2-201ENST00000623212 4637 ntBASIC14.14□□□□□ -0.15
CGREF1Q99674 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CGREF1Q99674 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.14□□□□□ -0.15
CGREF1Q99674 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.14□□□□□ -0.15
CGREF1Q99674 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.14□□□□□ -0.15
CGREF1Q99674 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 SPDYE18-201ENST00000510091 1050 ntBASIC14.14□□□□□ -0.15
CGREF1Q99674 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.14□□□□□ -0.15
CGREF1Q99674 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 AC025678.2-201ENST00000562061 970 ntBASIC14.14□□□□□ -0.15
CGREF1Q99674 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 SRD5A3P1-201ENST00000603021 949 ntBASIC14.14□□□□□ -0.15
CGREF1Q99674 AC093813.1-201ENST00000605066 256 ntBASIC14.14□□□□□ -0.15
CGREF1Q99674 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 BX539320.1-201ENST00000623759 877 ntBASIC14.14□□□□□ -0.15
CGREF1Q99674 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.14□□□□□ -0.15
CGREF1Q99674 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.14□□□□□ -0.15
CGREF1Q99674 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CGREF1Q99674 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGREF1Q99674 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGREF1Q99674 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CGREF1Q99674 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGREF1Q99674 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CGREF1Q99674 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGREF1Q99674 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CGREF1Q99674 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGREF1Q99674 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CGREF1Q99674 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms