Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TPT1P6-201ENST00000458298 514 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 RN7SL288P-201ENST00000490496 291 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC010976.2-201ENST00000609697 852 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 BX322534.1-201ENST00000635574 241 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC215524.1-201ENST00000635696 241 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC018529.2-202ENST00000611482 3087 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 RN7SL578P-201ENST00000477781 283 ntBASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 OR5BD1P-201ENST00000532527 817 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 DERL2-206ENST00000572834 589 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC138035.3-201ENST00000622706 2791 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 MIR645-201ENST00000385283 94 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC104961.1-201ENST00000427605 771 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC004066.1-201ENST00000502488 802 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC005014.1-201ENST00000432006 2976 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms