Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AL355306.1-201ENST00000415580 579 ntBASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AC097359.3-201ENST00000603982 1210 ntBASIC11.31□□□□□ -0.6
AP1S3Q96PC3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ACE3P-201ENST00000423435 1973 ntBASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 AL607033.1-201ENST00000623900 1599 ntBASIC11.3□□□□□ -0.6
AP1S3Q96PC3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 GHSR-202ENST00000427970 912 ntBASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms