Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 KRT18P32-201ENST00000424695 1287 ntBASIC15□□□□□ -0.01
CHMP6Q96FZ7 HIST3H2BA-201ENST00000436555 524 ntBASIC15□□□□□ -0.01
CHMP6Q96FZ7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 AL365181.3-201ENST00000605886 3222 ntBASIC15□□□□□ -0.01
CHMP6Q96FZ7 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP6Q96FZ7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15□□□□□ -0.01
CHMP6Q96FZ7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 AC069335.1-201ENST00000489972 472 ntBASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 SLED1-202ENST00000512051 380 ntBASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP6Q96FZ7 AC072061.1-201ENST00000569710 2234 ntBASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms