Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 AP000593.2-201ENST00000542775 1433 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 AL359881.3-201ENST00000602640 1721 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 TPM3P8-201ENST00000330554 643 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 AC011495.1-201ENST00000498085 584 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 AC103988.2-201ENST00000561804 725 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 AC027307.3-201ENST00000594262 1100 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 LINC01230-201ENST00000625222 3017 ntBASIC15.68■□□□□ 0.1
TRIM11Q96F44 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM11Q96F44 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM11Q96F44 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC139712.1-201ENST00000378256 1875 ntBASIC15.67■□□□□ 0.1
TRIM11Q96F44 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 INE2-201ENST00000630399 1874 ntBASIC15.67■□□□□ 0.1
TRIM11Q96F44 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC215219.1-201ENST00000400706 1817 ntBASIC15.67■□□□□ 0.1
TRIM11Q96F44 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 AL355385.1-201ENST00000606123 409 ntBASIC15.67■□□□□ 0.1
TRIM11Q96F44 AC132938.4-201ENST00000623835 848 ntBASIC15.67■□□□□ 0.1
TRIM11Q96F44 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM11Q96F44 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM11Q96F44 TCAM1P-207ENST00000485295 1537 ntBASIC15.67■□□□□ 0.1
TRIM11Q96F44 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms