Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
AP3S1Q92572 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 MIR346-201ENST00000362234 95 ntBASIC13.1□□□□□ -0.31
AP3S1Q92572 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S1Q92572 AL353705.2-201ENST00000428243 662 ntBASIC13.1□□□□□ -0.31
AP3S1Q92572 HIST3H2BA-201ENST00000436555 524 ntBASIC13.1□□□□□ -0.31
AP3S1Q92572 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S1Q92572 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S1Q92572 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S1Q92572 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 AC072061.1-201ENST00000569710 2234 ntBASIC13.1□□□□□ -0.31
AP3S1Q92572 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S1Q92572 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
AP3S1Q92572 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S1Q92572 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
AP3S1Q92572 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 PCDHB18P-202ENST00000526308 3197 ntBASIC13.1□□□□□ -0.31
AP3S1Q92572 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP3S1Q92572 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 AL365181.3-201ENST00000605886 3222 ntBASIC13.09□□□□□ -0.31
AP3S1Q92572 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S1Q92572 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
AP3S1Q92572 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S1Q92572 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP3S1Q92572 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 SPDYE17-201ENST00000412399 783 ntBASIC13.09□□□□□ -0.31
AP3S1Q92572 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms