Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 PRSS30P-206ENST00000641773 873 ntBASIC14.07□□□□□ -0.16
TM9SF4Q92544 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM9SF4Q92544 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TM9SF4Q92544 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 AC092506.1-202ENST00000401022 528 ntBASIC14.06□□□□□ -0.16
TM9SF4Q92544 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.06□□□□□ -0.16
TM9SF4Q92544 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 FAM8A4P-201ENST00000435433 1213 ntBASIC14.06□□□□□ -0.16
TM9SF4Q92544 POM121L10P-201ENST00000436994 1285 ntBASIC14.06□□□□□ -0.16
TM9SF4Q92544 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 AKR7A2P1-201ENST00000460134 915 ntBASIC14.06□□□□□ -0.16
TM9SF4Q92544 RPSAP36-202ENST00000494591 1261 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms