Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAF3IP1Q8TDR0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 TLE1P1-201ENST00000422965 589 ntBASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 AC015802.1-201ENST00000588104 1449 ntBASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAF3IP1Q8TDR0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 DGCR5-201ENST00000399539 862 ntBASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 AP006294.1-201ENST00000415407 339 ntBASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 FO681548.1-201ENST00000455617 1132 ntBASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 PTP4A1P2-201ENST00000546033 454 ntBASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAF3IP1Q8TDR0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms