Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC090505.1-201ENST00000430515 1834 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PDIA3P1-201ENST00000471856 1510 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 CD8B2-202ENST00000417670 633 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC006453.4-201ENST00000636949 1252 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AC136759.1-202ENST00000530858 2194 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 KHSRPP1-201ENST00000427983 1768 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 RN7SL832P-201ENST00000607781 1756 ntBASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH19Q8TAB3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 AL590440.2-201ENST00000641973 1595 ntBASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 AC006001.1-201ENST00000325130 474 ntBASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 CTBP2P5-201ENST00000454986 1264 ntBASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 MIR4683-201ENST00000579659 81 ntBASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 AC138951.2-201ENST00000623455 1161 ntBASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 543.9 ms