Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 TOMM22P5-201ENST00000416399 439 ntBASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 MIR6069-201ENST00000620069 79 ntBASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 AC079781.4-201ENST00000641908 219 ntBASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.73□□□□□ -0.05
RFWD2Q8NHY2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 AC004066.1-201ENST00000502488 802 ntBASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 AC026150.2-201ENST00000564693 1156 ntBASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 AC007967.4-201ENST00000614700 386 ntBASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 MIR6080-201ENST00000617359 66 ntBASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RFWD2Q8NHY2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AC114271.1-201ENST00000612689 2813 ntBASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AP006288.1-201ENST00000446065 395 ntBASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD2Q8NHY2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms