Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BEST2Q8NFU1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST2Q8NFU1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AC106794.1-201ENST00000506935 792 ntBASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AC005740.2-201ENST00000511085 419 ntBASIC15.9■□□□□ 0.14
BEST2Q8NFU1 SCARNA20.5-201ENST00000516991 142 ntBASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 AL008718.2-201ENST00000609206 1313 ntBASIC15.9■□□□□ 0.14
BEST2Q8NFU1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST2Q8NFU1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 RN7SL163P-201ENST00000583100 276 ntBASIC15.89■□□□□ 0.13
BEST2Q8NFU1 AC005324.6-201ENST00000587972 613 ntBASIC15.89■□□□□ 0.13
BEST2Q8NFU1 AC020914.3-201ENST00000594712 304 ntBASIC15.89■□□□□ 0.13
BEST2Q8NFU1 AL451050.2-201ENST00000606967 682 ntBASIC15.89■□□□□ 0.13
BEST2Q8NFU1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.89■□□□□ 0.13
BEST2Q8NFU1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 AC004899.1-201ENST00000424687 1714 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms