Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 RN7SKP175-201ENST00000408472 289 ntBASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 HLA-V-201ENST00000429037 534 ntBASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 BNIP3P42-201ENST00000454982 569 ntBASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 BNIP3P29-201ENST00000598302 571 ntBASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 AC011447.5-201ENST00000616168 564 ntBASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB11FIP4Q86YS3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC006504.5-208ENST00000588784 2401 ntBASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 OR8S1-201ENST00000310194 1080 ntBASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC131206.1-201ENST00000538078 1211 ntBASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB11FIP4Q86YS3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB11FIP4Q86YS3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms