Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AC138969.2-201ENST00000532739 9932 ntBASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AC127383.1-201ENST00000444697 1800 ntBASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 INTS4P1-203ENST00000641008 3683 ntBASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 LINC01115-203ENST00000606068 577 ntBASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AC004461.2-201ENST00000629517 803 ntBASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PCDHB17P-202ENST00000623466 3066 ntBASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 AC092127.1-201ENST00000567093 3455 ntBASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM53Q6P2H8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AC074338.1-201ENST00000416825 156 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 FAM8A3P-201ENST00000427218 844 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 RPL13P2-201ENST00000440687 659 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms