Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 PPT1-215ENST00000641471 2368 ntBASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 GRK6P1-201ENST00000400595 1711 ntBASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AL109954.1-202ENST00000564051 2148 ntBASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AL008707.1-201ENST00000422498 534 ntBASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AC100827.2-201ENST00000563214 1194 ntBASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AC132192.2-201ENST00000596206 1147 ntBASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AC138649.2-201ENST00000615886 705 ntBASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ZBED1P1-201ENST00000502364 1930 ntBASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
H3F3CQ6NXT2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 TUBBP5-203ENST00000508529 1334 ntBASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms