Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 FGD5P1-202ENST00000614866 2498 ntBASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 RNVU1-8-201ENST00000364272 125 ntBASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 MIR4472-1-201ENST00000584349 80 ntBASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 AC005357.2-202ENST00000590507 1060 ntBASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 HPX-213ENST00000615166 826 ntTSL 5 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SPHKAPQ2M3C7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 AC025186.1-201ENST00000478174 870 ntBASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHKAPQ2M3C7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SPHKAPQ2M3C7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 AL157792.1-201ENST00000488281 530 ntBASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 CHCHD2P2-201ENST00000503744 321 ntBASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHKAPQ2M3C7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHKAPQ2M3C7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
SPHKAPQ2M3C7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHKAPQ2M3C7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SPHKAPQ2M3C7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHKAPQ2M3C7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHKAPQ2M3C7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 399.5 ms