Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.17■□□□□ 0.66
COL16A1Q07092 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL16A1Q07092 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC19.17■□□□□ 0.66
COL16A1Q07092 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL16A1Q07092 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.17■□□□□ 0.66
COL16A1Q07092 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL16A1Q07092 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL16A1Q07092 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC19.16■□□□□ 0.66
COL16A1Q07092 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 MIR632-201ENST00000385193 94 ntBASIC19.16■□□□□ 0.66
COL16A1Q07092 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL16A1Q07092 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC19.16■□□□□ 0.66
COL16A1Q07092 SAP18P2-201ENST00000434334 459 ntBASIC19.16■□□□□ 0.66
COL16A1Q07092 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.16■□□□□ 0.66
COL16A1Q07092 MST1L-204ENST00000545160 559 ntTSL 4 BASIC19.16■□□□□ 0.66
COL16A1Q07092 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.16■□□□□ 0.66
COL16A1Q07092 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL16A1Q07092 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC19.16■□□□□ 0.66
COL16A1Q07092 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL16A1Q07092 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL16A1Q07092 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL16A1Q07092 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC19.15■□□□□ 0.66
COL16A1Q07092 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC19.15■□□□□ 0.66
COL16A1Q07092 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
COL16A1Q07092 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19.15■□□□□ 0.66
COL16A1Q07092 AC112250.1-201ENST00000504640 745 ntBASIC19.15■□□□□ 0.66
COL16A1Q07092 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.15■□□□□ 0.66
COL16A1Q07092 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL16A1Q07092 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
COL16A1Q07092 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COL16A1Q07092 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.15■□□□□ 0.66
COL16A1Q07092 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.15■□□□□ 0.66
COL16A1Q07092 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL16A1Q07092 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL16A1Q07092 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL16A1Q07092 RPSAP6-201ENST00000417882 882 ntBASIC19.14■□□□□ 0.66
COL16A1Q07092 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC19.14■□□□□ 0.66
COL16A1Q07092 YY1P2-201ENST00000438766 948 ntBASIC19.14■□□□□ 0.66
COL16A1Q07092 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC19.14■□□□□ 0.66
COL16A1Q07092 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL16A1Q07092 AC112220.4-201ENST00000604982 1263 ntBASIC19.14■□□□□ 0.66
COL16A1Q07092 AC022001.3-201ENST00000606330 596 ntBASIC19.14■□□□□ 0.66
COL16A1Q07092 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.66
COL16A1Q07092 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC19.14■□□□□ 0.66
COL16A1Q07092 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC19.14■□□□□ 0.66
COL16A1Q07092 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC19.14■□□□□ 0.66
COL16A1Q07092 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL16A1Q07092 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL16A1Q07092 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.14■□□□□ 0.65
COL16A1Q07092 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.14■□□□□ 0.65
COL16A1Q07092 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 NKILA-202ENST00000614771 2598 ntBASIC19.14■□□□□ 0.65
COL16A1Q07092 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
COL16A1Q07092 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL16A1Q07092 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms