Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H6P61129 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZC3H6P61129 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ZC3H6P61129 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H6P61129 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZC3H6P61129 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZC3H6P61129 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 BRD7P5-201ENST00000299197 1822 ntBASIC19.47■□□□□ 0.71
ZC3H6P61129 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.47■□□□□ 0.71
ZC3H6P61129 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.47■□□□□ 0.71
ZC3H6P61129 RPL35P9-201ENST00000446059 350 ntBASIC19.47■□□□□ 0.71
ZC3H6P61129 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.47■□□□□ 0.71
ZC3H6P61129 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ZC3H6P61129 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.47■□□□□ 0.71
ZC3H6P61129 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.47■□□□□ 0.71
ZC3H6P61129 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZC3H6P61129 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.47■□□□□ 0.71
ZC3H6P61129 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H6P61129 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H6P61129 AC008894.3-201ENST00000624324 3103 ntBASIC19.47■□□□□ 0.71
ZC3H6P61129 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 LINC00554-201ENST00000564841 3011 ntBASIC19.46■□□□□ 0.71
ZC3H6P61129 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZC3H6P61129 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZC3H6P61129 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.46■□□□□ 0.71
ZC3H6P61129 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.46■□□□□ 0.71
ZC3H6P61129 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ZC3H6P61129 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.46■□□□□ 0.71
ZC3H6P61129 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H6P61129 FAM86KP-201ENST00000509817 987 ntBASIC19.46■□□□□ 0.71
ZC3H6P61129 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H6P61129 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H6P61129 AP001527.2-201ENST00000614441 631 ntBASIC19.46■□□□□ 0.71
ZC3H6P61129 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H6P61129 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H6P61129 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.45■□□□□ 0.7
ZC3H6P61129 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.45■□□□□ 0.7
ZC3H6P61129 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZC3H6P61129 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.45■□□□□ 0.7
ZC3H6P61129 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.45■□□□□ 0.7
ZC3H6P61129 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZC3H6P61129 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H6P61129 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZC3H6P61129 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.45■□□□□ 0.7
ZC3H6P61129 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms