Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.17□□□□□ -0.46
SPCS3P61009 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 AC069262.1-201ENST00000539058 672 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 TIMM17BP1-201ENST00000545713 516 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.17□□□□□ -0.46
SPCS3P61009 AC010336.2-201ENST00000564226 506 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.17□□□□□ -0.46
SPCS3P61009 AL121894.2-201ENST00000602977 491 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 TEX28P1-201ENST00000613479 1221 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 TEX28P2-201ENST00000617764 1221 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
SPCS3P61009 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 AL354702.1-201ENST00000442006 1960 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.17□□□□□ -0.46
SPCS3P61009 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
SPCS3P61009 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.17□□□□□ -0.46
SPCS3P61009 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.17□□□□□ -0.46
SPCS3P61009 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SPCS3P61009 AL591122.2-201ENST00000624125 1853 ntBASIC12.17□□□□□ -0.46
SPCS3P61009 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPCS3P61009 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 AL022342.1-201ENST00000400363 863 ntBASIC12.16□□□□□ -0.46
SPCS3P61009 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms