Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 AC027612.1-201ENST00000445234 2395 ntBASIC13.66□□□□□ -0.22
CLDN20P56880 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLDN20P56880 AC055811.4-201ENST00000624039 1754 ntBASIC13.66□□□□□ -0.22
CLDN20P56880 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN20P56880 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.66□□□□□ -0.22
CLDN20P56880 FAM197Y7-201ENST00000432892 766 ntBASIC13.66□□□□□ -0.22
CLDN20P56880 RPL7P3-201ENST00000441388 714 ntBASIC13.66□□□□□ -0.22
CLDN20P56880 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN20P56880 AL590640.2-201ENST00000457038 527 ntBASIC13.66□□□□□ -0.22
CLDN20P56880 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN20P56880 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 AL359881.2-201ENST00000602973 570 ntBASIC13.66□□□□□ -0.22
CLDN20P56880 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN20P56880 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CLDN20P56880 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CLDN20P56880 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CLDN20P56880 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN20P56880 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CLDN20P56880 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN20P56880 AP000812.2-201ENST00000538934 718 ntBASIC13.65□□□□□ -0.22
CLDN20P56880 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN20P56880 AP005482.1-201ENST00000563722 1273 ntBASIC13.65□□□□□ -0.22
CLDN20P56880 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN20P56880 AC133552.6-201ENST00000613406 534 ntBASIC13.65□□□□□ -0.22
CLDN20P56880 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 COX11-210ENST00000639671 696 ntBASIC13.65□□□□□ -0.22
CLDN20P56880 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN20P56880 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN20P56880 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN20P56880 AL356585.2-201ENST00000625078 2396 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms