Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLDN12P56749 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN12P56749 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 TMEM198B-204ENST00000484016 896 ntBASIC12.96□□□□□ -0.33
CLDN12P56749 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDN12P56749 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CLDN12P56749 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN12P56749 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN12P56749 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLDN12P56749 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN12P56749 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN12P56749 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN12P56749 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDN12P56749 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 RN7SL832P-201ENST00000607781 1756 ntBASIC12.96□□□□□ -0.34
CLDN12P56749 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CLDN12P56749 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.96□□□□□ -0.34
CLDN12P56749 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN12P56749 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CLDN12P56749 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CLDN12P56749 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDN12P56749 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDN12P56749 RN7SL618P-201ENST00000477850 296 ntBASIC12.95□□□□□ -0.34
CLDN12P56749 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDN12P56749 AC010336.2-201ENST00000564226 506 ntBASIC12.95□□□□□ -0.34
CLDN12P56749 AC051619.7-201ENST00000568314 623 ntBASIC12.95□□□□□ -0.34
CLDN12P56749 AC005829.1-201ENST00000570002 483 ntBASIC12.95□□□□□ -0.34
CLDN12P56749 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CLDN12P56749 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CLDN12P56749 MIR4469-201ENST00000583919 79 ntBASIC12.95□□□□□ -0.34
CLDN12P56749 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.95□□□□□ -0.34
CLDN12P56749 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.95□□□□□ -0.34
CLDN12P56749 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDN12P56749 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN12P56749 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms