Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC092933.1-201ENST00000393644 945 ntBASIC16.29■□□□□ 0.2
PMS1P54277 RN7SKP175-201ENST00000408472 289 ntBASIC16.29■□□□□ 0.2
PMS1P54277 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 FTLP10-202ENST00000505798 471 ntBASIC16.29■□□□□ 0.2
PMS1P54277 USP32P1-208ENST00000506594 1164 ntBASIC16.29■□□□□ 0.2
PMS1P54277 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.29■□□□□ 0.2
PMS1P54277 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 AC025279.2-201ENST00000569730 653 ntBASIC16.29■□□□□ 0.2
PMS1P54277 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
PMS1P54277 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PMS1P54277 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PMS1P54277 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PMS1P54277 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PMS1P54277 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PMS1P54277 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.28■□□□□ 0.2
PMS1P54277 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.28■□□□□ 0.2
PMS1P54277 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.28■□□□□ 0.2
PMS1P54277 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.28■□□□□ 0.2
PMS1P54277 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.28■□□□□ 0.2
PMS1P54277 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.28■□□□□ 0.2
PMS1P54277 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PMS1P54277 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PMS1P54277 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PMS1P54277 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.28■□□□□ 0.2
PMS1P54277 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.27■□□□□ 0.2
PMS1P54277 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PMS1P54277 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PMS1P54277 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.27■□□□□ 0.2
PMS1P54277 RN7SL752P-201ENST00000463779 287 ntBASIC16.27■□□□□ 0.2
PMS1P54277 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PMS1P54277 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.27■□□□□ 0.2
PMS1P54277 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.27■□□□□ 0.2
PMS1P54277 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PMS1P54277 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PMS1P54277 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PMS1P54277 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMS1P54277 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.27■□□□□ 0.19
PMS1P54277 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMS1P54277 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.27■□□□□ 0.19
PMS1P54277 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PMS1P54277 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMS1P54277 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
PMS1P54277 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMS1P54277 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMS1P54277 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.27■□□□□ 0.19
PMS1P54277 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PMS1P54277 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms