Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 BAK1P1-201ENST00000317045 636 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.59□□□□□ -0.07
LIMK1P53667 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC004466.1-201ENST00000599515 1080 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 AC009884.2-201ENST00000603110 324 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 AP003392.6-201ENST00000607709 325 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 LINC01783-202ENST00000614408 828 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 BX284668.2-205ENST00000619677 828 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.59□□□□□ -0.07
LIMK1P53667 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK1P53667 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK1P53667 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK1P53667 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK1P53667 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK1P53667 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
LIMK1P53667 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.58□□□□□ -0.07
LIMK1P53667 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK1P53667 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
LIMK1P53667 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.58□□□□□ -0.07
LIMK1P53667 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LIMK1P53667 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK1P53667 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.58□□□□□ -0.08
LIMK1P53667 AL627422.1-201ENST00000434104 580 ntBASIC14.58□□□□□ -0.08
LIMK1P53667 AP000358.1-201ENST00000456260 156 ntBASIC14.58□□□□□ -0.08
LIMK1P53667 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LIMK1P53667 AC093752.3-201ENST00000567343 901 ntBASIC14.58□□□□□ -0.08
LIMK1P53667 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 FRMPD2B-201ENST00000431305 1347 ntBASIC14.58□□□□□ -0.08
LIMK1P53667 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.58□□□□□ -0.08
LIMK1P53667 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.58□□□□□ -0.08
LIMK1P53667 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LIMK1P53667 AC112693.3-201ENST00000624819 1983 ntBASIC14.58□□□□□ -0.08
LIMK1P53667 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK1P53667 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK1P53667 AC232323.1-201ENST00000540724 2099 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 REXO1L5P-201ENST00000622260 2098 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 MBLAC2-202ENST00000514906 1936 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 AC013726.1-201ENST00000563747 2285 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms