Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NEDD4P46934 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.36■□□□□ 0.37
NEDD4P46934 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.36■□□□□ 0.37
NEDD4P46934 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.36■□□□□ 0.37
NEDD4P46934 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.36■□□□□ 0.37
NEDD4P46934 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NEDD4P46934 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NEDD4P46934 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.36■□□□□ 0.37
NEDD4P46934 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.36■□□□□ 0.37
NEDD4P46934 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.36■□□□□ 0.37
NEDD4P46934 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.36■□□□□ 0.37
NEDD4P46934 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 AC022748.3-201ENST00000621828 275 ntBASIC17.36■□□□□ 0.37
NEDD4P46934 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 AC015656.1-201ENST00000624209 3578 ntBASIC17.36■□□□□ 0.37
NEDD4P46934 AC215219.1-201ENST00000400706 1817 ntBASIC17.36■□□□□ 0.37
NEDD4P46934 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.36■□□□□ 0.37
NEDD4P46934 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.36■□□□□ 0.37
NEDD4P46934 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.36■□□□□ 0.37
NEDD4P46934 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEDD4P46934 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD4P46934 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD4P46934 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NEDD4P46934 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.35■□□□□ 0.37
NEDD4P46934 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 POM121L10P-201ENST00000436994 1285 ntBASIC17.35■□□□□ 0.37
NEDD4P46934 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD4P46934 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.35■□□□□ 0.37
NEDD4P46934 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NEDD4P46934 MIR6869-201ENST00000619434 62 ntBASIC17.35■□□□□ 0.37
NEDD4P46934 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.35■□□□□ 0.37
NEDD4P46934 AC068587.6-202ENST00000641839 5619 ntBASIC17.35■□□□□ 0.37
NEDD4P46934 AC015802.1-201ENST00000588104 1449 ntBASIC17.35■□□□□ 0.37
NEDD4P46934 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NEDD4P46934 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NEDD4P46934 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
NEDD4P46934 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEDD4P46934 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD4P46934 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 AL008718.2-201ENST00000609206 1313 ntBASIC17.34■□□□□ 0.37
NEDD4P46934 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD4P46934 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
NEDD4P46934 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NEDD4P46934 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.34■□□□□ 0.37
NEDD4P46934 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.34■□□□□ 0.37
NEDD4P46934 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.34■□□□□ 0.37
NEDD4P46934 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NEDD4P46934 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD4P46934 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.34■□□□□ 0.37
NEDD4P46934 AC005962.1-201ENST00000584100 773 ntBASIC17.34■□□□□ 0.37
NEDD4P46934 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.34■□□□□ 0.37
NEDD4P46934 AL118558.3-201ENST00000607414 1079 ntBASIC17.34■□□□□ 0.37
NEDD4P46934 AC007663.3-201ENST00000609632 465 ntBASIC17.34■□□□□ 0.37
NEDD4P46934 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.34■□□□□ 0.37
NEDD4P46934 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.34■□□□□ 0.37
NEDD4P46934 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
NEDD4P46934 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.34■□□□□ 0.37
NEDD4P46934 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NEDD4P46934 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NEDD4P46934 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEDD4P46934 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NEDD4P46934 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms