Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 TLE1P1-201ENST00000422965 589 ntBASIC14.05□□□□□ -0.16
CDKN2CP42773 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 FO681548.1-201ENST00000455617 1132 ntBASIC14.05□□□□□ -0.16
CDKN2CP42773 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDKN2CP42773 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.05□□□□□ -0.16
CDKN2CP42773 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKN2CP42773 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.05□□□□□ -0.16
CDKN2CP42773 CHCHD2P3-201ENST00000603038 451 ntBASIC14.05□□□□□ -0.16
CDKN2CP42773 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDKN2CP42773 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKN2CP42773 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKN2CP42773 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
CDKN2CP42773 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDKN2CP42773 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKN2CP42773 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN2CP42773 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 AC015688.4-201ENST00000580780 1647 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDKN2CP42773 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 ACTBP8-201ENST00000403258 1108 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 RFPL4AP1-201ENST00000530883 850 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 AC131206.1-201ENST00000538078 1211 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKN2CP42773 AP005019.2-201ENST00000615104 511 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 AL603764.1-201ENST00000636452 321 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 AL138725.1-201ENST00000407347 1314 ntBASIC14.04□□□□□ -0.16
CDKN2CP42773 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2CP42773 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2CP42773 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2CP42773 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2CP42773 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2CP42773 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2CP42773 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 RN7SKP230-201ENST00000365642 335 ntBASIC14.03□□□□□ -0.16
CDKN2CP42773 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2CP42773 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2CP42773 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2CP42773 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2CP42773 SERBP1P5-201ENST00000510079 1181 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms