Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL15A1P39059 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 Z69890.1-201ENST00000382990 339 ntBASIC18.51■□□□□ 0.55
COL15A1P39059 HIST2H2BA-201ENST00000412169 381 ntBASIC18.51■□□□□ 0.55
COL15A1P39059 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.51■□□□□ 0.55
COL15A1P39059 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.51■□□□□ 0.55
COL15A1P39059 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.51■□□□□ 0.55
COL15A1P39059 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL15A1P39059 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
COL15A1P39059 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL15A1P39059 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.51■□□□□ 0.55
COL15A1P39059 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 AC090502.4-201ENST00000551714 1386 ntBASIC18.5■□□□□ 0.55
COL15A1P39059 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.5■□□□□ 0.55
COL15A1P39059 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL15A1P39059 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.5■□□□□ 0.55
COL15A1P39059 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL15A1P39059 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 LYPLA2P1-203ENST00000447689 696 ntBASIC18.5■□□□□ 0.55
COL15A1P39059 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.5■□□□□ 0.55
COL15A1P39059 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.5■□□□□ 0.55
COL15A1P39059 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.5■□□□□ 0.55
COL15A1P39059 AC005041.3-201ENST00000606287 649 ntBASIC18.5■□□□□ 0.55
COL15A1P39059 AL132780.4-201ENST00000624870 1135 ntBASIC18.5■□□□□ 0.55
COL15A1P39059 AP001184.1-201ENST00000637936 376 ntBASIC18.5■□□□□ 0.55
COL15A1P39059 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.5■□□□□ 0.55
COL15A1P39059 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.5■□□□□ 0.55
COL15A1P39059 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL15A1P39059 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL15A1P39059 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.49■□□□□ 0.55
COL15A1P39059 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.49■□□□□ 0.55
COL15A1P39059 TNRC18P2-201ENST00000417666 2714 ntBASIC18.49■□□□□ 0.55
COL15A1P39059 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL15A1P39059 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.49■□□□□ 0.55
COL15A1P39059 RN7SL277P-201ENST00000481521 288 ntBASIC18.49■□□□□ 0.55
COL15A1P39059 RN7SL530P-201ENST00000485097 298 ntBASIC18.49■□□□□ 0.55
COL15A1P39059 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.49■□□□□ 0.55
COL15A1P39059 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.49■□□□□ 0.55
COL15A1P39059 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.49■□□□□ 0.55
COL15A1P39059 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
COL15A1P39059 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.49■□□□□ 0.55
COL15A1P39059 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.49■□□□□ 0.55
COL15A1P39059 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL15A1P39059 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.49■□□□□ 0.55
COL15A1P39059 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.49■□□□□ 0.55
COL15A1P39059 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 CICP23-201ENST00000605013 2741 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms