Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.93□□□□□ -0.02
LTBRP36941 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
LTBRP36941 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LTBRP36941 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LTBRP36941 AC106827.1-201ENST00000366454 431 ntBASIC14.93□□□□□ -0.02
LTBRP36941 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 AL590235.1-201ENST00000564650 861 ntBASIC14.93□□□□□ -0.02
LTBRP36941 AP005264.5-201ENST00000590066 467 ntBASIC14.93□□□□□ -0.02
LTBRP36941 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.93□□□□□ -0.02
LTBRP36941 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.93□□□□□ -0.02
LTBRP36941 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LTBRP36941 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.93□□□□□ -0.02
LTBRP36941 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.93□□□□□ -0.02
LTBRP36941 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LTBRP36941 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 OR7E115P-201ENST00000382617 1024 ntBASIC14.92□□□□□ -0.02
LTBRP36941 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 ASS1P2-201ENST00000439895 1223 ntBASIC14.92□□□□□ -0.02
LTBRP36941 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 CHCHD2P2-201ENST00000503744 321 ntBASIC14.92□□□□□ -0.02
LTBRP36941 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.92□□□□□ -0.02
LTBRP36941 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.92□□□□□ -0.02
LTBRP36941 IGHEP2-201ENST00000519308 1256 ntBASIC14.92□□□□□ -0.02
LTBRP36941 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 KNOP1P1-201ENST00000542108 989 ntBASIC14.92□□□□□ -0.02
LTBRP36941 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 AL359091.4-201ENST00000610052 409 ntBASIC14.92□□□□□ -0.02
LTBRP36941 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.92□□□□□ -0.02
LTBRP36941 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LTBRP36941 ODCP-201ENST00000459650 1639 ntBASIC14.92□□□□□ -0.02
LTBRP36941 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LTBRP36941 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
LTBRP36941 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms