Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.2□□□□□ -0.14
KRT20P35900 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 AC092135.3-201ENST00000624151 1846 ntBASIC14.2□□□□□ -0.14
KRT20P35900 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT20P35900 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT20P35900 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT20P35900 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT20P35900 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT20P35900 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT20P35900 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.19□□□□□ -0.14
KRT20P35900 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
KRT20P35900 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.19□□□□□ -0.14
KRT20P35900 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT20P35900 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
KRT20P35900 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 CU634019.7-201ENST00000624153 1185 ntBASIC14.19□□□□□ -0.14
KRT20P35900 FP236241.2-201ENST00000624906 1185 ntBASIC14.19□□□□□ -0.14
KRT20P35900 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 AL033527.5-201ENST00000641382 801 ntBASIC14.19□□□□□ -0.14
KRT20P35900 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 AC018529.2-202ENST00000611482 3087 ntBASIC14.19□□□□□ -0.14
KRT20P35900 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT20P35900 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KRT20P35900 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KRT20P35900 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
KRT20P35900 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 MBLAC2-202ENST00000514906 1936 ntBASIC14.18□□□□□ -0.14
KRT20P35900 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
KRT20P35900 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 AL645937.2-201ENST00000396808 931 ntBASIC14.18□□□□□ -0.14
KRT20P35900 DGCR5-201ENST00000399539 862 ntBASIC14.18□□□□□ -0.14
KRT20P35900 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT20P35900 RN7SL752P-201ENST00000463779 287 ntBASIC14.18□□□□□ -0.14
KRT20P35900 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT20P35900 GAPDHP40-201ENST00000505218 1006 ntBASIC14.18□□□□□ -0.14
KRT20P35900 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.18□□□□□ -0.14
KRT20P35900 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
KRT20P35900 WASH4P-201ENST00000564273 1246 ntBASIC14.18□□□□□ -0.14
KRT20P35900 CTBP2P3-201ENST00000585629 1255 ntBASIC14.18□□□□□ -0.14
KRT20P35900 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
KRT20P35900 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT20P35900 AC025048.6-201ENST00000634326 1161 ntBASIC14.18□□□□□ -0.14
KRT20P35900 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT20P35900 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.18□□□□□ -0.14
KRT20P35900 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms