Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.88■□□□□ 0.29
COPB2P35606 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
COPB2P35606 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
COPB2P35606 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 TBC1D3J-201ENST00000620719 1426 ntBASIC16.87■□□□□ 0.29
COPB2P35606 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
COPB2P35606 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
COPB2P35606 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 REXO1L2P-201ENST00000425429 2069 ntBASIC16.87■□□□□ 0.29
COPB2P35606 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.87■□□□□ 0.29
COPB2P35606 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.87■□□□□ 0.29
COPB2P35606 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.87■□□□□ 0.29
COPB2P35606 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.87■□□□□ 0.29
COPB2P35606 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.87■□□□□ 0.29
COPB2P35606 IGLV3-15-201ENST00000518356 244 ntBASIC16.87■□□□□ 0.29
COPB2P35606 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.87■□□□□ 0.29
COPB2P35606 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.87■□□□□ 0.29
COPB2P35606 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 AC103691.2-201ENST00000618824 433 ntBASIC16.87■□□□□ 0.29
COPB2P35606 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 FRMPD2B-201ENST00000431305 1347 ntBASIC16.87■□□□□ 0.29
COPB2P35606 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.87■□□□□ 0.29
COPB2P35606 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 FAM90A2P-201ENST00000511144 1395 ntBASIC16.87■□□□□ 0.29
COPB2P35606 FAM90A25P-201ENST00000528404 1395 ntBASIC16.87■□□□□ 0.29
COPB2P35606 AC023157.3-201ENST00000619086 2088 ntBASIC16.87■□□□□ 0.29
COPB2P35606 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COPB2P35606 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.87■□□□□ 0.29
COPB2P35606 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 AC138035.3-201ENST00000622706 2791 ntBASIC16.86■□□□□ 0.29
COPB2P35606 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.86■□□□□ 0.29
COPB2P35606 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 XBP1P1-201ENST00000436573 652 ntBASIC16.86■□□□□ 0.29
COPB2P35606 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
COPB2P35606 NOC2LP1-201ENST00000450578 752 ntBASIC16.86■□□□□ 0.29
COPB2P35606 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.86■□□□□ 0.29
COPB2P35606 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.86■□□□□ 0.29
COPB2P35606 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.86■□□□□ 0.29
COPB2P35606 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.86■□□□□ 0.29
COPB2P35606 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.86■□□□□ 0.29
COPB2P35606 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.86■□□□□ 0.29
COPB2P35606 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 AHCYP4-201ENST00000419201 1315 ntBASIC16.86■□□□□ 0.29
COPB2P35606 MRPL37P1-201ENST00000592451 1337 ntBASIC16.86■□□□□ 0.29
COPB2P35606 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COPB2P35606 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.86■□□□□ 0.29
COPB2P35606 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COPB2P35606 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COPB2P35606 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.86■□□□□ 0.29
COPB2P35606 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms