Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
KRT9P35527 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 KRT8P22-201ENST00000562317 1415 ntBASIC16.28■□□□□ 0.2
KRT9P35527 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT9P35527 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 MIR661-201ENST00000384842 89 ntBASIC16.28■□□□□ 0.2
KRT9P35527 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 AL442647.2-201ENST00000429864 857 ntBASIC16.28■□□□□ 0.2
KRT9P35527 MYCLP2-201ENST00000449268 967 ntBASIC16.28■□□□□ 0.2
KRT9P35527 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT9P35527 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 AC092552.1-201ENST00000547243 906 ntBASIC16.28■□□□□ 0.2
KRT9P35527 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT9P35527 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.28■□□□□ 0.2
KRT9P35527 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT9P35527 CHCHD2P3-201ENST00000603038 451 ntBASIC16.28■□□□□ 0.2
KRT9P35527 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT9P35527 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 INE2-201ENST00000630399 1874 ntBASIC16.28■□□□□ 0.2
KRT9P35527 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT9P35527 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT9P35527 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
KRT9P35527 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT9P35527 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT9P35527 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT9P35527 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
KRT9P35527 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
KRT9P35527 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT9P35527 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT9P35527 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KRT9P35527 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
KRT9P35527 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT9P35527 C1QBPP1-201ENST00000400117 770 ntBASIC16.27■□□□□ 0.2
KRT9P35527 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT9P35527 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT9P35527 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
KRT9P35527 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT9P35527 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT9P35527 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.27■□□□□ 0.2
KRT9P35527 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT9P35527 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT9P35527 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT9P35527 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT9P35527 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT9P35527 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
KRT9P35527 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
KRT9P35527 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
KRT9P35527 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KRT9P35527 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
KRT9P35527 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT9P35527 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KRT9P35527 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT9P35527 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT9P35527 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT9P35527 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT9P35527 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms