Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC006372.4-201ENST00000624122 1543 ntBASIC18.35■□□□□ 0.53
RFC4P35249 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 AQP7P5-201ENST00000428759 1049 ntBASIC18.35■□□□□ 0.53
RFC4P35249 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.35■□□□□ 0.53
RFC4P35249 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 AQP7P4-201ENST00000447083 1042 ntBASIC18.35■□□□□ 0.53
RFC4P35249 AQP7P2-201ENST00000453967 1041 ntBASIC18.35■□□□□ 0.53
RFC4P35249 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.35■□□□□ 0.53
RFC4P35249 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.35■□□□□ 0.53
RFC4P35249 AQP7P3-201ENST00000624547 1041 ntBASIC18.35■□□□□ 0.53
RFC4P35249 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RFC4P35249 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC4P35249 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RFC4P35249 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RFC4P35249 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A21P-201ENST00000510875 1396 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A15P-201ENST00000514465 1395 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A6P-201ENST00000515148 1394 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A16P-201ENST00000526662 1395 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A9P-201ENST00000527940 1395 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A5P-201ENST00000528738 1395 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A14P-201ENST00000530386 1395 ntBASIC18.34■□□□□ 0.53
RFC4P35249 FAM90A13P-201ENST00000534703 1395 ntBASIC18.34■□□□□ 0.53
RFC4P35249 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RFC4P35249 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.34■□□□□ 0.53
RFC4P35249 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC4P35249 AC018638.5-201ENST00000450885 754 ntBASIC18.34■□□□□ 0.53
RFC4P35249 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC4P35249 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 AP001527.2-201ENST00000614441 631 ntBASIC18.34■□□□□ 0.53
RFC4P35249 AC002044.2-201ENST00000624910 970 ntBASIC18.34■□□□□ 0.53
RFC4P35249 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC4P35249 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC4P35249 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
RFC4P35249 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RFC4P35249 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RFC4P35249 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC4P35249 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC4P35249 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RFC4P35249 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC4P35249 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms