Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXA6P31267 AC012073.1-201ENST00000606114 1108 ntBASIC14.38□□□□□ -0.11
HOXA6P31267 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.38□□□□□ -0.11
HOXA6P31267 AC021016.3-201ENST00000608367 477 ntBASIC14.38□□□□□ -0.11
HOXA6P31267 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HOXA6P31267 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXA6P31267 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 AC023024.2-201ENST00000623561 1993 ntBASIC14.38□□□□□ -0.11
HOXA6P31267 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXA6P31267 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HOXA6P31267 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HOXA6P31267 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 AC112693.3-201ENST00000624819 1983 ntBASIC14.37□□□□□ -0.11
HOXA6P31267 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.37□□□□□ -0.11
HOXA6P31267 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.37□□□□□ -0.11
HOXA6P31267 RNA5SP406-201ENST00000516106 112 ntBASIC14.37□□□□□ -0.11
HOXA6P31267 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HOXA6P31267 SNORD3B-1-201ENST00000577988 758 ntBASIC14.37□□□□□ -0.11
HOXA6P31267 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.37□□□□□ -0.11
HOXA6P31267 AC006483.2-201ENST00000609813 515 ntBASIC14.37□□□□□ -0.11
HOXA6P31267 AL118522.1-201ENST00000611368 560 ntBASIC14.37□□□□□ -0.11
HOXA6P31267 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 AC148477.9-201ENST00000623974 539 ntBASIC14.37□□□□□ -0.11
HOXA6P31267 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.37□□□□□ -0.11
HOXA6P31267 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
HOXA6P31267 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HOXA6P31267 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXA6P31267 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.36□□□□□ -0.11
HOXA6P31267 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HOXA6P31267 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.36□□□□□ -0.11
HOXA6P31267 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 MIR1301-201ENST00000408518 82 ntBASIC14.36□□□□□ -0.11
HOXA6P31267 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.36□□□□□ -0.11
HOXA6P31267 OR51A9P-201ENST00000422578 911 ntBASIC14.36□□□□□ -0.11
HOXA6P31267 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.36□□□□□ -0.11
HOXA6P31267 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.36□□□□□ -0.11
HOXA6P31267 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.36□□□□□ -0.11
HOXA6P31267 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.36□□□□□ -0.11
HOXA6P31267 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.36□□□□□ -0.11
HOXA6P31267 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.36□□□□□ -0.11
HOXA6P31267 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.36□□□□□ -0.11
HOXA6P31267 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.36□□□□□ -0.11
HOXA6P31267 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.36□□□□□ -0.11
HOXA6P31267 AP005264.6-204ENST00000588436 719 ntBASIC14.36□□□□□ -0.11
HOXA6P31267 CYP4F36P-201ENST00000589193 186 ntBASIC14.36□□□□□ -0.11
HOXA6P31267 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms