Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SHC1P29353 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SHC1P29353 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.66□□□□□ -0.22
SHC1P29353 AC026434.2-201ENST00000506094 1078 ntBASIC13.66□□□□□ -0.22
SHC1P29353 AC022616.1-201ENST00000518688 554 ntBASIC13.66□□□□□ -0.22
SHC1P29353 KRT17P8-201ENST00000540749 863 ntBASIC13.66□□□□□ -0.22
SHC1P29353 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.66□□□□□ -0.22
SHC1P29353 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.66□□□□□ -0.22
SHC1P29353 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 AC239800.4-201ENST00000603712 296 ntBASIC13.66□□□□□ -0.22
SHC1P29353 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SHC1P29353 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.66□□□□□ -0.22
SHC1P29353 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SHC1P29353 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 BEND3P1-201ENST00000421591 1944 ntBASIC13.66□□□□□ -0.22
SHC1P29353 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
SHC1P29353 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHC1P29353 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.65□□□□□ -0.22
SHC1P29353 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SHC1P29353 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
SHC1P29353 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SHC1P29353 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.65□□□□□ -0.22
SHC1P29353 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.65□□□□□ -0.22
SHC1P29353 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 HILS1-202ENST00000545329 423 ntBASIC13.65□□□□□ -0.22
SHC1P29353 DUX4L47-201ENST00000566374 394 ntBASIC13.65□□□□□ -0.22
SHC1P29353 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.65□□□□□ -0.22
SHC1P29353 AL022328.1-201ENST00000610050 478 ntBASIC13.65□□□□□ -0.22
SHC1P29353 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.65□□□□□ -0.22
SHC1P29353 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.65□□□□□ -0.22
SHC1P29353 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHC1P29353 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms