Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RXRBP28702 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.83■□□□□ 0.61
RXRBP28702 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.83■□□□□ 0.61
RXRBP28702 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RXRBP28702 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RXRBP28702 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RXRBP28702 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 U73169.1-201ENST00000395152 367 ntBASIC18.83■□□□□ 0.6
RXRBP28702 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.83■□□□□ 0.6
RXRBP28702 AC092573.1-201ENST00000433054 884 ntBASIC18.83■□□□□ 0.6
RXRBP28702 AL136084.1-201ENST00000449172 318 ntBASIC18.83■□□□□ 0.6
RXRBP28702 TPT1P11-201ENST00000458482 498 ntBASIC18.83■□□□□ 0.6
RXRBP28702 OR2A1-AS1-203ENST00000468575 568 ntBASIC18.83■□□□□ 0.6
RXRBP28702 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.83■□□□□ 0.6
RXRBP28702 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC18.83■□□□□ 0.6
RXRBP28702 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC18.83■□□□□ 0.6
RXRBP28702 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 AC091691.1-201ENST00000583587 1018 ntBASIC18.83■□□□□ 0.6
RXRBP28702 AC090386.2-201ENST00000623010 1039 ntBASIC18.83■□□□□ 0.6
RXRBP28702 AC026336.4-201ENST00000624565 1050 ntBASIC18.83■□□□□ 0.6
RXRBP28702 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RXRBP28702 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RXRBP28702 AC092127.1-201ENST00000567093 3455 ntBASIC18.83■□□□□ 0.6
RXRBP28702 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RXRBP28702 AL596087.1-201ENST00000400979 1969 ntBASIC18.82■□□□□ 0.6
RXRBP28702 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RXRBP28702 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.82■□□□□ 0.6
RXRBP28702 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.82■□□□□ 0.6
RXRBP28702 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 PDXDC2P-206ENST00000534700 1315 ntBASIC18.82■□□□□ 0.6
RXRBP28702 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.82■□□□□ 0.6
RXRBP28702 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.82■□□□□ 0.6
RXRBP28702 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC18.82■□□□□ 0.6
RXRBP28702 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC18.82■□□□□ 0.6
RXRBP28702 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 ZNF877P-201ENST00000437614 612 ntBASIC18.82■□□□□ 0.6
RXRBP28702 CCND3P1-201ENST00000438347 580 ntBASIC18.82■□□□□ 0.6
RXRBP28702 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC18.82■□□□□ 0.6
RXRBP28702 KRT8P34-201ENST00000577607 1044 ntBASIC18.82■□□□□ 0.6
RXRBP28702 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC18.82■□□□□ 0.6
RXRBP28702 BOLA3P2-201ENST00000586496 323 ntBASIC18.82■□□□□ 0.6
RXRBP28702 EMP3-204ENST00000596315 761 ntTSL 2 BASIC18.82■□□□□ 0.6
RXRBP28702 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.82■□□□□ 0.6
RXRBP28702 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RXRBP28702 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RXRBP28702 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RXRBP28702 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 AC022532.1-201ENST00000624563 1728 ntBASIC18.81■□□□□ 0.6
RXRBP28702 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.81■□□□□ 0.6
RXRBP28702 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.81■□□□□ 0.6
RXRBP28702 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RXRBP28702 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 ABCD1P4-201ENST00000399687 604 ntBASIC18.81■□□□□ 0.6
RXRBP28702 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.81■□□□□ 0.6
RXRBP28702 AC004910.1-201ENST00000433493 787 ntBASIC18.81■□□□□ 0.6
RXRBP28702 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC18.81■□□□□ 0.6
RXRBP28702 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RXRBP28702 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.81■□□□□ 0.6
RXRBP28702 AC093300.1-201ENST00000510368 1201 ntBASIC18.81■□□□□ 0.6
RXRBP28702 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC18.81■□□□□ 0.6
RXRBP28702 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC18.81■□□□□ 0.6
RXRBP28702 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.81■□□□□ 0.6
RXRBP28702 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RXRBP28702 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.81■□□□□ 0.6
RXRBP28702 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 AC090340.1-201ENST00000620778 4980 ntBASIC18.81■□□□□ 0.6
RXRBP28702 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms