Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VARSP26640 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.69□□□□□ -0.06
VARSP26640 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 AC104989.1-201ENST00000519711 778 ntBASIC14.69□□□□□ -0.06
VARSP26640 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.69□□□□□ -0.06
VARSP26640 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.69□□□□□ -0.06
VARSP26640 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.69□□□□□ -0.06
VARSP26640 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.69□□□□□ -0.06
VARSP26640 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.69□□□□□ -0.06
VARSP26640 AL033527.5-201ENST00000641382 801 ntBASIC14.69□□□□□ -0.06
VARSP26640 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.69□□□□□ -0.06
VARSP26640 AL137783.1-201ENST00000623494 1896 ntBASIC14.69□□□□□ -0.06
VARSP26640 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.69□□□□□ -0.06
VARSP26640 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VARSP26640 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
VARSP26640 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VARSP26640 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
VARSP26640 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VARSP26640 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 RNU1-114P-201ENST00000365297 166 ntBASIC14.68□□□□□ -0.06
VARSP26640 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VARSP26640 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.68□□□□□ -0.06
VARSP26640 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms