Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN3P26045 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTPN3P26045 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN3P26045 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 AC006504.5-208ENST00000588784 2401 ntBASIC15.11■□□□□ 0.01
PTPN3P26045 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.11■□□□□ 0.01
PTPN3P26045 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN3P26045 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 AC004945.1-201ENST00000416738 983 ntBASIC15.11■□□□□ 0.01
PTPN3P26045 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN3P26045 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN3P26045 KRT17P7-201ENST00000451704 1104 ntBASIC15.11■□□□□ 0.01
PTPN3P26045 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN3P26045 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN3P26045 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN3P26045 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN3P26045 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN3P26045 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 AC139712.1-201ENST00000378256 1875 ntBASIC15.11■□□□□ 0.01
PTPN3P26045 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PTPN3P26045 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN3P26045 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN3P26045 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN3P26045 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN3P26045 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PTPN3P26045 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN3P26045 CR383656.12-201ENST00000549567 513 ntBASIC15.1■□□□□ 0.01
PTPN3P26045 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.1■□□□□ 0.01
PTPN3P26045 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.1■□□□□ 0.01
PTPN3P26045 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
PTPN3P26045 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PTPN3P26045 AC012645.4-201ENST00000610691 1061 ntBASIC15.1■□□□□ 0.01
PTPN3P26045 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 AL590440.2-201ENST00000641973 1595 ntBASIC15.1■□□□□ 0.01
PTPN3P26045 AC215219.1-201ENST00000400706 1817 ntBASIC15.1■□□□□ 0.01
PTPN3P26045 AC090505.1-201ENST00000430515 1834 ntBASIC15.1■□□□□ 0.01
PTPN3P26045 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PTPN3P26045 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN3P26045 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN3P26045 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PTPN3P26045 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN3P26045 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN3P26045 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms