Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CCL1P22362 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CCL1P22362 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL1P22362 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL1P22362 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL1P22362 AC011495.1-201ENST00000498085 584 ntBASIC12.73□□□□□ -0.37
CCL1P22362 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 AC190387.1-201ENST00000551683 408 ntBASIC12.73□□□□□ -0.37
CCL1P22362 AC106820.3-201ENST00000561653 397 ntBASIC12.73□□□□□ -0.37
CCL1P22362 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL1P22362 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCL1P22362 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL1P22362 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
CCL1P22362 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCL1P22362 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 AC009093.2-202ENST00000620513 2079 ntBASIC12.73□□□□□ -0.37
CCL1P22362 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL1P22362 AC104581.4-201ENST00000623126 3052 ntBASIC12.73□□□□□ -0.37
CCL1P22362 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
CCL1P22362 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 AC236430.1-201ENST00000402231 743 ntBASIC12.72□□□□□ -0.37
CCL1P22362 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.72□□□□□ -0.37
CCL1P22362 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.72□□□□□ -0.37
CCL1P22362 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.72□□□□□ -0.37
CCL1P22362 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.72□□□□□ -0.37
CCL1P22362 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 AC027237.1-201ENST00000560942 655 ntBASIC12.72□□□□□ -0.37
CCL1P22362 SPCS2P1-201ENST00000561636 679 ntBASIC12.72□□□□□ -0.37
CCL1P22362 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.72□□□□□ -0.37
CCL1P22362 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 AC027796.2-201ENST00000575326 344 ntBASIC12.72□□□□□ -0.37
CCL1P22362 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.72□□□□□ -0.37
CCL1P22362 AC132938.4-201ENST00000623835 848 ntBASIC12.72□□□□□ -0.37
CCL1P22362 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 AC015818.8-201ENST00000587907 1519 ntBASIC12.72□□□□□ -0.37
CCL1P22362 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.72□□□□□ -0.37
CCL1P22362 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
CCL1P22362 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms