Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 BTBD7P1-201ENST00000447253 1453 ntBASIC14.34□□□□□ -0.11
CAPN3P20807 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CAPN3P20807 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CAPN3P20807 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CAPN3P20807 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CAPN3P20807 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.34□□□□□ -0.11
CAPN3P20807 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.34□□□□□ -0.11
CAPN3P20807 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 FAM8A2P-201ENST00000528813 1142 ntBASIC14.34□□□□□ -0.11
CAPN3P20807 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 TIMM17BP1-201ENST00000545713 516 ntBASIC14.34□□□□□ -0.11
CAPN3P20807 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 AC107373.2-201ENST00000607735 490 ntBASIC14.34□□□□□ -0.11
CAPN3P20807 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 AC105206.1-202ENST00000314927 2368 ntBASIC14.34□□□□□ -0.11
CAPN3P20807 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CAPN3P20807 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN3P20807 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPN3P20807 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN3P20807 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.33□□□□□ -0.11
CAPN3P20807 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
CAPN3P20807 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 AL133338.1-201ENST00000565695 1517 ntBASIC14.33□□□□□ -0.12
CAPN3P20807 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN3P20807 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPN3P20807 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CAPN3P20807 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 AC079776.1-201ENST00000401540 1152 ntBASIC14.33□□□□□ -0.12
CAPN3P20807 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
CAPN3P20807 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.33□□□□□ -0.12
CAPN3P20807 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN3P20807 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN3P20807 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN3P20807 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN3P20807 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
CAPN3P20807 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN3P20807 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CAPN3P20807 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms