Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.07□□□□□ -0.32
ATF1P18846 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 AL589987.1-201ENST00000453380 819 ntBASIC13.07□□□□□ -0.32
ATF1P18846 AC135586.1-201ENST00000539323 574 ntBASIC13.07□□□□□ -0.32
ATF1P18846 AP001160.2-201ENST00000596071 487 ntBASIC13.07□□□□□ -0.32
ATF1P18846 SRD5A3P1-201ENST00000603021 949 ntBASIC13.07□□□□□ -0.32
ATF1P18846 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 AL137783.1-201ENST00000623494 1896 ntBASIC13.07□□□□□ -0.32
ATF1P18846 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 AC093525.8-201ENST00000624099 1342 ntBASIC13.07□□□□□ -0.32
ATF1P18846 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 NUTM2HP-201ENST00000442076 2498 ntBASIC13.06□□□□□ -0.32
ATF1P18846 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 DRD5P1-201ENST00000456605 1438 ntBASIC13.06□□□□□ -0.32
ATF1P18846 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.06□□□□□ -0.32
ATF1P18846 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ATF1P18846 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 AL645937.2-201ENST00000396808 931 ntBASIC13.06□□□□□ -0.32
ATF1P18846 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.06□□□□□ -0.32
ATF1P18846 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 AL353779.1-201ENST00000434793 351 ntBASIC13.06□□□□□ -0.32
ATF1P18846 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 FAM86LP-201ENST00000478302 853 ntBASIC13.06□□□□□ -0.32
ATF1P18846 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.06□□□□□ -0.32
ATF1P18846 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.06□□□□□ -0.32
ATF1P18846 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 AC036164.1-201ENST00000570544 333 ntBASIC13.06□□□□□ -0.32
ATF1P18846 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.06□□□□□ -0.32
ATF1P18846 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ATF1P18846 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms